What is Medicinal Chemistry (section 4)

 Section 4: Modern Drug Discovery

Modern drug discovery is a systematic, science-driven process that uses advanced technologies, computers, and biological knowledge to develop new and better medicines. It is more efficient, safer, and faster than older methods. In this section, you will learn how modern science has transformed the way we find new drugs and bring them to patients.


1. What Is Modern Drug Discovery?

Modern drug discovery means using tools like:

  • Computers (in-silico methods)
  • Genetic and protein information (genomics and proteomics)
  • High-throughput screening
  • Data analysis using AI and machine learning
  • Target-based design

This approach saves time, reduces costs, and increases the chances of finding safe and effective medicines.


2. Key Features of Modern Drug Discovery

Modern drug discovery is characterised by:

a. Target-Based Approach

Instead of randomly testing substances, scientists first identify a biological target (usually a protein or enzyme) that plays a key role in a disease. The drug is then designed to interact with this target.

b. Rational Drug Design

Using knowledge of chemistry and biology, scientists design molecules that fit the target like a key fits a lock. This is faster and more specific than traditional methods.

c. Structure-Based Drug Design (SBDD)

Scientists use 3D models of target proteins (from X-ray crystallography or NMR) to design drugs that fit their structure.

 

d. High-Throughput Screening (HTS)

Thousands of compounds are tested quickly using machines and robots to see if they affect the target. Positive results are called “hits”.

e. Combinatorial Chemistry

Many different compounds are made by combining sets of chemical building blocks. This increases the number of compounds available for testing.

f. Bioinformatics and Computer Modelling

Computers simulate how a drug might behave in the body. This helps avoid side effects and reduces the need for animal testing in early stages.


3. Steps in Modern Drug Discovery

Although the basic steps of drug discovery remain the same, modern techniques have made each step more advanced and precise.

Step 1: Target Identification and Validation

  • Use gene sequencing and protein studies to identify potential targets.
  • Confirm that changing the activity of this target will affect the disease.

Step 2: Lead Compound Discovery

  • Use HTS, virtual screening, or data mining to identify promising compounds.
  • These are “hits” which are further optimised.

Step 3: Lead Optimisation

  • Modify chemical structure to improve potency, selectivity, and safety.
  • Evaluate properties like solubility, stability, and absorption.

Step 4: Preclinical Studies

  • Conduct in-vitro (cell culture) and in-vivo (animal) testing.
  • Study drug absorption, distribution, metabolism, excretion, and toxicity (ADMET).

Step 5: Clinical Trials

  • Test in humans (Phase I, II, III) to assess safety and effectiveness.

 

Step 6: Regulatory Review and Approval

  • Submit data to regulatory agencies (like FDA, CDSCO) for marketing approval.

Step 7: Post-Marketing Surveillance

  • Continue monitoring the drug in real-world conditions for rare or long-term side effects.

4. Technologies Used in Modern Drug Discovery

a. Genomics and Proteomics

  • Genomics: Study of genes to identify disease-related mutations.
  • Proteomics: Study of proteins, especially those involved in disease pathways.

These help identify novel drug targets and biomarkers.

b. Molecular Modelling

  • Uses computer software to model drug-target interactions.
  • Predicts how a molecule will fit and bind to the target.

c. Quantitative Structure–Activity Relationship (QSAR)

  • Mathematical models that link the structure of a molecule to its biological activity.
  • Helps predict how effective a new compound might be.

d. Artificial Intelligence (AI) and Machine Learning

  • AI systems analyse millions of molecules and predict which ones are most likely to succeed.
  • Saves time and avoids unnecessary experiments.

e. Pharmacogenomics

  • Studies how a person’s genetic makeup affects their response to drugs.
  • Helps develop personalised medicines.

 

5. Examples of Success in Modern Drug Discovery

Some of the most successful modern drugs have come from rational design and target-based discovery:

  • Imatinib (Gleevec): Designed to target a specific protein in cancer cells (used in chronic myeloid leukemia).
  • Oseltamivir (Tamiflu): Designed to inhibit a flu virus protein.
  • HIV Protease Inhibitors: Designed to block a key enzyme in HIV replication.
  • Monoclonal Antibodies: Designed to target proteins involved in cancer or immune disorders (e.g., trastuzumab for breast cancer).

6. Advantages of Modern Drug Discovery

Feature

Benefit

Target-specific design

Reduces side effects

Faster screening

Saves time

Use of AI and modelling

Cuts costs

Improved safety prediction

Fewer failures in clinical trials

Personalised drug development

More effective treatment for individuals


7. Challenges in Modern Drug Discovery

Despite its power, modern drug discovery still faces challenges:

  • High cost: Can cost over ₹1000 crores to develop one drug.
  • Time-consuming: Even with fast screening, approval takes 10–12 years.
  • High failure rate: Many compounds fail in clinical trials due to side effects or poor results.
  • Ethical concerns: Testing on animals and humans must be carefully monitored.
  • Antibiotic resistance and rare diseases: Still difficult to treat despite modern techniques.

8. Drug Repurposing: A Modern Strategy

Drug repurposing means finding new uses for old drugs. It is faster and cheaper than developing a new drug.

 

Example:

  • Thalidomide: Once banned, now used for multiple myeloma.
  • Hydroxychloroquine: Originally for malaria, repurposed for COVID-19 trials.

9. Future Trends in Drug Discovery

The future of modern drug discovery lies in:

  • Gene therapy: Editing faulty genes to treat diseases.
  • RNA-based drugs: Like mRNA vaccines (Pfizer, Moderna for COVID-19).
  • Nano-medicines: Drug delivery using nanoparticles.
  • Lab-on-a-chip: Miniature labs to test drugs quickly.
  • Synthetic biology: Designing cells to produce useful compounds.

Summary Table

Modern Concept

Purpose

Target-Based Design

Select a specific protein or gene to act on

High-Throughput Screening

Test thousands of compounds rapidly

Molecular Modelling

Simulate drug–target interactions

QSAR

Predict activity from chemical structure

Pharmacogenomics

Personalised medicine

AI and Big Data

Smart analysis of drug data

Drug Repurposing

Find new uses for known drugs


Conclusion

Modern drug discovery is more scientific, structured, and technology-driven than ever before. It has made drug development faster, more precise, and less risky. As students of pharmacy, understanding this approach will prepare you to participate in cutting-edge research and innovation in the pharmaceutical industry. You will be able to appreciate the role of technology, data, and interdisciplinary knowledge in creating the medicines of tomorrow.

 

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